(setq gnutls-algorithm-priority "NORMAL:-VERS-TLS1.3")
(custom-set-variables
 ;; custom-set-variables was added by Custom.
 ;; If you edit it by hand, you could mess it up, so be careful.
 ;; Your init file should contain only one such instance.
 ;; If there is more than one, they won't work right.
 '(company-idle-delay 20.0)
 '(display-line-numbers-type t)
 '(global-auto-revert-mode t)
 '(global-display-line-numbers-mode t)
 '(gofmt-command "goimports")
 '(inhibit-startup-screen t)
 '(magit-revert-buffers (quote silent) t)
 '(org-agenda-files (quote ("~/org/1.TODO.org")))
 '(package-archives
   (quote
	(("gnu" . "https://elpa.gnu.org/packages/")
	 ("melpa" . "https://melpa.org/packages/"))))
 '(package-selected-packages
   (quote
	(projectile langtool flycheck elpy lsp-mode smart-tabs-mode opencl-mode company-go yasnippet-snippets yasnippet company-lsp ess ample-zen-theme auctex-latexmk dockerfile-mode dpkg-dev-el cmake-ide debian-changelog-mode debian-el nginx-mode sudo-edit typescript-mode yaml-mode string-inflection protobuf-mode markdown-mode auctex flymake-go go-mode srefactor company-glsl glsl-mode company company-cmake company-irony company-irony-c-headers irony magit lua-mode)))
 '(pdf-view-midnight-colors (quote ("#DCDCCC" . "#383838")))
 '(safe-local-variable-values
   (quote
	((TeX-master . t)
	 (TeX-parse-self . t)
	 )))
 '(srefactor--getter-prefix "Get")
 '(srefactor--getter-setter-capitalize-p t)
 '(srefactor--setter-prefix "Set")
 '(tab-width 4)
 )
(custom-set-faces
 ;; custom-set-faces was added by Custom.
 ;; If you edit it by hand, you could mess it up, so be careful.
 ;; Your init file should contain only one such instance.
 ;; If there is more than one, they won't work right.
 '(flymake-errline ((t (:foreground "brightred" :underline t))) t)
 '(flymake-infoline ((t (:foreground "color-49" :underline "color-49"))))
 '(flymake-warnline ((t (:foreground "color-208" :underline t))) t)
 '(font-lock-function-name-face ((t (:foreground "burlywood4"))))
 '(font-lock-string-face ((t (:foreground "brightmagenta"))))
 '(line-number ((t (:inherit (shadow default) :foreground "gray25"))))
 '(line-number-current-line ((t (:inherit line-number :foreground "gray40"))))
 '(whitespace-hspace ((t (:foreground "lightgray"))))
 '(whitespace-indentation ((t (:foreground "color-52"))))
 '(whitespace-newline ((t (:foreground "color-237" :weight normal))))
 '(whitespace-space ((t (:foreground "color-237"))))
 '(whitespace-space-after-tab ((t (:foreground "firebrick"))))
 '(whitespace-tab ((t (:foreground "color-237")))))

(add-to-list 'auto-mode-alist '("\\.m$" . octave-mode ))
(toggle-scroll-bar -1)
(menu-bar-mode -1)
(tool-bar-mode -1)
(add-to-list 'default-frame-alist '(fullscreen . maximized))
(add-hook 'before-save-hook 'delete-trailing-whitespace)

;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
;; Keymap
;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
(global-set-key (kbd "<f9>") 'compile)
(global-set-key (kbd "C-x g") 'magit-status)

;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
;; Company
;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;

(defun my-company-mode-hook ()
  (global-set-key (kbd "C-M-i") 'company-complete))
(add-hook 'company-mode-hook 'my-company-mode-hook)

;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
;; CMake
;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;

(defun my-cmake-mode-hook ()
  (company-mode)
  )
(add-hook 'cmake-mode-hook 'my-cmake-mode-hook)

;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
;; C/C++
;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;

(defun c-c++-header ()
  "sets either c-mode or c++-mode, whichever is appropriate for
header"
  (interactive)
  (let ((c-file (concat (substring (buffer-file-name) 0 -1) "c")))
    (if (file-exists-p c-file)
        (c-mode)
      (c++-mode))))
(add-to-list 'auto-mode-alist '("\\.h\\'" . c-c++-header))

(defun my-c-common-hook ()
  (global-set-key (kbd "C-c C-h") 'ff-find-other-file)
  (require 'compile)
  (add-to-list 'compilation-error-regexp-alist '("^[0-9]+: \\(.*\\):\\([0-9]+\\): Failure$" 1 2))
  (global-set-key (kbd "C-x f") 'find-file-at-point)
  (add-hook 'irony-mode-hook 'company-irony-setup-begin-commands)
  (add-hook 'irony-mode-hook 'irony-cdb-autosetup-compile-options)
  (require 'irony)
  (require 'yasnippet)
  (push 'glsl-mode irony-supported-major-modes)
  (push 'protobuf-mode irony-supported-major-modes)
  (push 'opencl-mode irony-supported-major-modes)
  (eval-after-load 'company
	'(add-to-list
	  'company-backends
	  '(company-irony-c-headers company-irony company-yasnippet)))
  (require 'company)
  (global-company-mode)
  (irony-mode)
  (define-key yas-minor-mode-map [(tab)] nil)
  (define-key yas-minor-mode-map (kbd "TAB") nil)
  (yas-minor-mode)
  (require 'srefactor)
;  (semantic-mode 1)
  (define-key c-mode-map (kbd "M-RET") 'srefactor-refactor-at-point)
  (define-key c++-mode-map (kbd "M-RET") 'srefactor-refactor-at-point)
										;  (semantic-mode)
										;  (load-file "/home/tuleu/devel/github.com/ffevotte/clang-tags/build/env.el")
  (c-set-offset 'inextern-lang 0)
  )
(add-hook 'c-mode-common-hook 'my-c-common-hook)


;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
;; TeX/LaTeX
;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
(defun my-LaTeX-hook ()
  (message "LaTeX hook")
  ;;  (require 'auctex-latexmk)
  ;;  (auctex-latexmk-setup)
  ;;  (setq auctex-latexmk-inherit-TeX-PDF-mode t)
  (add-to-list 'TeX-command-list
			   '("latexmk" "latexmk -pdf -interaction=nonstopmode -shell-escape %s" TeX-run-TeX nil t
				 :help "Run latexmk on file"))
  (setq TeX-command-default "latexmk")
;  (setq fill-column 10000000)
;  (visual-line-mode)
;  (window-margin-mode)
;  (setq window-margin-width 80)
  (setq LaTeX-includegraphics-read-file 'LaTeX-includegraphics-read-file-relative)
  (setq LaTeX-includegraphics-strip-extension-flag nil)
  (add-to-list 'LaTeX-includegraphics-extensions '"tikz")
  ;; use Okular as default pdf viewer
  (setq TeX-view-program-selection '((output-pdf "Okular PDF Viewer")))
  (add-to-list 'TeX-expand-list '("%(dir)" (lambda nil (expand-file-name (TeX-master-directory)))))
  (setq TeX-view-program-list
        '(("Okular PDF Viewer" "okular --unique %o#src:%n%(dir)./%b")))
  ;;  (setq auctex-latexmk-inherit-TeX-PDF-mode t)
  ;; launch server if not launched
  (load "server")
  (unless (server-running-p) (server-start))
  )
(add-hook 'LaTeX-mode-hook 'my-LaTeX-hook)

(defun my-TeX-hook ()
  (message "TeX hook")
  (setq reftex-plug-into-AUCTeX t)
  (global-set-key (kbd "C-x f") 'find-file-at-point)
  (turn-on-reftex)
  (setq TeX-parse-self t)
  (setq TeX-auto-save t)
  (TeX-PDF-mode)
  (setq reftex-ref-macro-prompt nil)
  (defun my-latex-insert-cite (&optional P)
	""
	(interactive "P")
	(TeX-insert-macro "cite")
	)
  (define-key LaTeX-mode-map [remap reftex-citation] 'my-latex-insert-cite)
  (add-hook 'before-save-hook 'delete-trailing-whitespace)
  (setq-default TeX-master nil)
  (defun my-latex-fill-paragraph (&optional P)
    "When called with prefix argument call `fill-paragraph'.
Otherwise split the current paragraph into one sentence per line."
    (interactive "P")
    (if (not P)
        (save-excursion
          (let ((fill-column 12345678)) ;; relies on dynamic binding
            (fill-paragraph) ;; this will not work correctly if the paragraph is
            ;; longer than 12345678 characters (in which case the
            ;; file must be at least 12MB long. This is unlikely.)
            (let ((end (save-excursion
                         (forward-paragraph 1)
                         (backward-sentence)
                         (point-marker))))  ;; remember where to stop
              (beginning-of-line)
              (while (progn (forward-sentence)
                            (<= (point) (marker-position end)))
                (just-one-space) ;; leaves only one space, point is after it
                (delete-char -1) ;; delete the space
                (insert " %");; insert a %
                (newline)        ;; and insert a newline
                (LaTeX-indent-line) ;; I only use this in combination with late, so this makes sense
                ))))
      ;; otherwise do ordinary fill paragraph
      (fill-paragraph P))
    )
  (define-key LaTeX-mode-map (kbd "M-q") 'my-latex-fill-paragraph)
  )
(add-hook 'TeX-mode-hook 'my-TeX-hook)

;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
;; Markdown
;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;

(defun my-markdown-hook ()
  (defun my-markdown-preview-buffer ()
	(require 'shr)
	(require 'eww)
	(interactive)
	(let* ((buf-this (buffer-name (current-buffer)))
		   (buf-html (get-buffer-create
					  (format "*my-md-html (%s)*" buf-this))))
	  (markdown-other-window (buffer-name buf-html))
	  (shr-render-buffer buf-html)
	  (eww-mode)
	  (kill-buffer buf-html))
	)
  (global-set-key (kbd "C-c C-c C-p") 'my-markdown-preview-buffer)
  (setq markdown-command "remarkable")
  )
(add-hook 'markdown-mode-hook 'my-markdown-hook)
(defun my-gfm-mode-hook ()
  (setq markdown-command "remarkable")
  )
(add-hook 'gfm-mode-hook 'my-gfm-mode-hook)

;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
;; Python
;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;

(defun my-python-mode-hook ()
  (require 'elpy)
  (require 'flycheck)
  (elpy-enable)
  (setq elpy-modules (delq 'elpy-module-flymake elpy-modules))
  (add-hook 'elpy-mode-hook (lambda ()
                            (add-hook 'before-save-hook
                                      'elpy-black-fix-code nil t)))
  (elpy-mode)
  )
(add-hook 'python-mode-hook 'my-python-mode-hook)

;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
;; Golang
;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;

(defun my-go-hook ()
  (require 'company)
  (require 'company-go)
;;  (require 'flymake-go)
  (company-mode)
  (setq gofmt-command "goimports")
  (add-hook 'before-save-hook 'gofmt-before-save)
  (set (make-local-variable 'company-backends) '(company-go))
  (flymake-mode)
  (global-set-key (kbd "C-c C-h") 'godef-describe)
  (global-set-key (kbd "C-c C-j") 'godef-jump)
  (setq compile-command "go build && go test -coverprofile=cover.out && go tool cover -html cover.out -o /tmp/cover.html")
  )
(add-hook 'go-mode-hook 'my-go-hook)

;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
;; HTML
;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
(defun my-html-hook ()
  (add-hook 'before-save-hook 'delete-trailing-whitespace)
  )
(add-hook 'html-mode-hook 'my-html-hook)

;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
;; Protobuf
;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;

(defun my-protobuf-mode-hook ()
  (defconst my-protobuf-style
	'((c-basic-offset . 4)
	  (indent-tabs-mode . t)))
  (c-add-style "my-style" my-protobuf-style t)
  (smart-tabs-mode)
  )
(add-hook 'protobuf-mode-hook 'my-protobuf-mode-hook)

;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
;; Typescript
;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;l

(defun my-typescript-mode-hook ()
  (setq create-lockfiles nil)
  (add-to-list 'compilation-error-regexp-alist '("^Error: \\(.*?\\):\\([0-9]+\\):\\([0-9]+\\)" 1 2 3))
  )
(add-hook 'typescript-mode-hook 'my-typescript-mode-hook)

(with-eval-after-load 'typescript-mode (add-hook 'typescript-mode-hook #'lsp))

;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
;; Language tool
;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;

(setq langtool-language-tool-server-jar "~/.languagetool/languagetool-server.jar")
(setq langtool-default-language "en-US")

(global-set-key (kbd "C-c l c") 'langtool-check)
(global-set-key (kbd "C-c l d") 'langtool-check-done)
(global-set-key (kbd "C-c l l") 'langtool-switch-default-language)
(global-set-key (kbd "C-c l s") 'langtool-show-message-at-point)
(global-set-key (kbd "C-c l b") 'langtool-correct-buffer)

;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
;; After Init
;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
(defun my-after-init-hook ()
  (add-to-list 'auto-mode-alist '("\\.md\\'" . gfm-mode))
  (add-to-list 'auto-mode-alist '("\\.markdown\\'" . gfm-mode))
  (require 'smart-tabs-mode)
  (smart-tabs-add-language-support cmake cmake-mode-hook
	(
	 (cmake-indent . cmake-tab-width)
	 )
	)
  (smart-tabs-add-language-support protobuf protobuf-mode-hook
	(
	 (c-indent-line . c-basic-offset)
	 (c-indent-region . c-basic-offset)
	 )
	)
  (smart-tabs-add-language-support html html-mode-hook
	(
	 (sgml-indent-line . sgml-basic-offset)
	 )
	)
  (smart-tabs-add-language-support glsl glsl-mode-hook
	(
	 (c-indent-line . c-basic-offset)
	 (c-indent-region . c-basic-offset)
	 )
	)
  (smart-tabs-add-language-support opencl opencl-mode-hook
	(
	 (c-indent-line . c-basic-offset)
	 (c-indent-region . c-basic-offset)
	 )
	)

  (smart-tabs-insinuate 'c 'javascript 'c++ 'cmake 'nxml 'protobuf 'html 'glsl)
  ;; do things after package initialization
  (load-theme 'ample-zen t)
  )
(add-hook 'after-init-hook 'my-after-init-hook)